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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015945281.1_cds_XP_016487836.1_78531
CDS Infomation

[gene=LOC107807896] [db_xref=GeneID:107807896] [protein=afadin- and alpha-actinin-binding protein-like] [protein_id=XP_016487836.1] [location=complement(join(9030..9038,10394..10451,10701..10744,11815..11934,12057..12134,12242..12352,14263..14340,14414..14479,14556..14630,15909..15971,16063..16152,16229..16325,17250..17347,18159..18270,18362..18396,18496..18528))] [gbkey=CDS]
Sequence

ATGTCTCCTACAGACAATGATTTCGATCTCAGACGCACATCTACTCCTCCTAGCGGCATG
GGAATCAGTGAGTATAATTTTGCAGATATAAACAATTTGGAGCACTGTGCTAAGTATCTC
AACCAAACTCTGGTCACCTTTGGATTCCCTGCTTCCCTCGATCTCTTTGCGCATGACCCT
GTTTCTATAGCAAGGACTTGCAATTGTGTATATGCACTATTGCAGCAAAGGCAGAGGGAT
ATTGAATTCAGAGAGTCTGCAAATGAGCAGAGACAACGGCTGTTATCAGACATATCAAGA
TTAGAGGCCAAAGTGGAGAGGCTGGAATCTCAAATACAAGCCAAAGATAGAGAGATAGCT
ACAATTACTAGAGAGGAAGCTAAAGCTACAGCAGCTCTGAAGGCACAAATTGACAAATTG
CAGAAGGAAAGAGATGAGTTTCAGAGGATGGTTCTTGGTAATCAGCAAGTCAGAACTCAG
CAGATATATGAAATGAAGAAAAAGGAAAAGGAGTATATAAAGTTACAAGAGAGGCTAAAT
CAAGTGTTGATGGAGAAAAAGAAGGAATCCAGATCGGGCATGGAGATAATGAATTTACTT
CAGAAAGAAGGGCGTCAACGTGGGACATGGAATGGGAAGAAGGCTGACAATGACTTCTAC
AAGAAGATTGTGGATGCTTATGAAGCAAAAAATCAAGAACTAGCTTCTGAAAATGCCGAT
TTGAGGGCATTATTGCGATCAATGCAGGGTGACATGCGTGAGTTCTTAAATGCCCCAAAT
GGTTCTTCTAGGCAGTCAGCAACAAGCAATGACAGGCTAGACGCAGATCACTTGCAGTCC
GCGTTAGGTGGCAGAACGGATGTTTTTGATCTGCCTCTCCACATGGCTAGGGATCAAATT
GAGGAAAGTCTGCGAAACAAGATGGCTTCTATCAAGGAGCGAATGGGTCAACTACAAGAT
GCACAAAAGGGCGCAGAAGTTTCCTCAGAAGTAACAGAGAGAGAGCTTGAGTTAGAAGCT
CAGCTTGTTGAGGCCAGGAGCATAATCCAAGAGCAGGCATCGATTATGTCCAAACATCTT
ACCAAGTCTGAGAAGCCAAGGCGATTGAGTGGCCATATGAATTCTGAAAGGGACCTACTC
ATTTCGTCCCCAACTGAGGGGCTGTGA

Peptide Sequence

PEP ID

XP_016487836.1
PEP Infomation

PREDICTED: afadin- and alpha-actinin-binding protein-like [Nicotiana tabacum]
Sequence

MSPTDNDFDLRRTSTPPSGMGISEYNFADINNLEHCAKYLNQTLVTFGFPASLDLFAHDP
VSIARTCNCVYALLQQRQRDIEFRESANEQRQRLLSDISRLEAKVERLESQIQAKDREIA
TITREEAKATAALKAQIDKLQKERDEFQRMVLGNQQVRTQQIYEMKKKEKEYIKLQERLN
QVLMEKKKESRSGMEIMNLLQKEGRQRGTWNGKKADNDFYKKIVDAYEAKNQELASENAD
LRALLRSMQGDMREFLNAPNGSSRQSATSNDRLDADHLQSALGGRTDVFDLPLHMARDQI
EESLRNKMASIKERMGQLQDAQKGAEVSSEVTERELELEAQLVEARSIIQEQASIMSKHL
TKSEKPRRLSGHMNSERDLLISSPTEGL

Transcript Sequence

Gene sequence data has not been registered.